Citation

If you are using BoNesis, please use at least the following citation:

Chevalier, S., Boyenval, D., Magaña-López, G., Roncalli, T., Vaginay, A., Paulevé, L. (2024). BoNesis: a Python-Based Declarative Environment for the Verification, Reprogramming, and Synthesis of Most Permissive Boolean Networks. In: Computational Methods in Systems Biology. CMSB 2024. Lecture Notes in Computer Science, vol 14971. Springer, Cham. doi:10.1007/978-3-031-71671-3_6

@InProceedings{bonesis-CMSB24,
    author = {Chevalier, St{\'e}phanie and Boyenval, D{\'e}borah and Maga{\\textasciitilde n}a L{\'o}pez, Gustavo and Roncalli, Th{\'e}o and Vaginay, Ath{\'e}na{\"i}s and Paulev{\'e}, Lo{\"i}c},
    title = "{BoNesis: a Python-based declarative environment for the verification, reprogramming, and synthesis of Most Permissive Boolean networks}",
    booktitle = "{22th International Conference on Computational Methods in Systems Biology (CMSB 2024)}",
    address = "Pisa, Italy",
    publisher = "{Springer}",
    series = "LNCS",
    year = "2024",
    doi = "10.1007/978-3-031-71671-3\_6"
}

See also Related publications for references related to specific aspects of methodology.